BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C06LP1|AL428518
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig294 1729 0.0
>3x_Contig294
Length = 2887
Score = 1729 bits (872), Expect = 0.0
Identities = 872/872 (100%)
Strand = Plus / Minus
Query: 1 catcgctaagcgccgacacatcttggaatactatcggttctgcaatgttccaagcactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1799 catcgctaagcgccgacacatcttggaatactatcggttctgcaatgttccaagcactgc 1740
Query: 61 gcgtgggactcaacagtgctcagttttccacggaatatgcatcagcaaactcgcaactta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1739 gcgtgggactcaacagtgctcagttttccacggaatatgcatcagcaaactcgcaactta 1680
Query: 121 ttcatgaacagatacgaacgtggatttgttgtaatattgtatcacaaacaatatctgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 ttcatgaacagatacgaacgtggatttgttgtaatattgtatcacaaacaatatctgcct 1620
Query: 181 cctttgggttccccgcatatgtctcttttgaccataccgttataaatacctgcaagattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 cctttgggttccccgcatatgtctcttttgaccataccgttataaatacctgcaagattt 1560
Query: 241 caacagtagagagtagtacgacagatttcatacctttttccatcaaacaaatgttacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 caacagtagagagtagtacgacagatttcatacctttttccatcaaacaaatgttacaaa 1500
Query: 301 ttgctcatttcgagaatcaaatcgtggatactatgaactcaaatcctagtaatatgagcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 ttgctcatttcgagaatcaaatcgtggatactatgaactcaaatcctagtaatatgagcg 1440
Query: 361 gccttgttgccaatgaggaaaaattaccattattacacgttttgaacagacaactaagcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 gccttgttgccaatgaggaaaaattaccattattacacgttttgaacagacaactaagcg 1380
Query: 421 aactagagttacagcttgataatgtgaaattagatgatatcagaagattcttacttctcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 aactagagttacagcttgataatgtgaaattagatgatatcagaagattcttacttctcg 1320
Query: 481 taacgaaggtgcacttgttgacgcactattttagcaatgttaccgataatgttgatccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 taacgaaggtgcacttgttgacgcactattttagcaatgttaccgataatgttgatccaa 1260
Query: 541 cttccgtccaaaaaatatctgtgaaagacatggaaacaagctttgcaactaaaagaggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 cttccgtccaaaaaatatctgtgaaagacatggaaacaagctttgcaactaaaagaggac 1200
Query: 601 tagtaatagcgtacaatgcagccgtaaaactcttgaaacatgcgaaatgtatgtggaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 tagtaatagcgtacaatgcagccgtaaaactcttgaaacatgcgaaatgtatgtggaaac 1140
Query: 661 gggatccactagctgtgaaatatcttccaggtgtttatgttcttaatatatggcaggcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 gggatccactagctgtgaaatatcttccaggtgtttatgttcttaatatatggcaggcag 1080
Query: 721 catcaataatatcaaagctagtccattcctcattgggctcaattatcgatgtcgatactg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 catcaataatatcaaagctagtccattcctcattgggctcaattatcgatgtcgatactg 1020
Query: 781 gtcatgaagtttatcaagatgctgtatcattaatttcgaatgcttctgtcctcaagtacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 gtcatgaagtttatcaagatgctgtatcattaatttcgaatgcttctgtcctcaagtacg 960
Query: 841 atatggcttatagatcagctggtattatgaga 872
||||||||||||||||||||||||||||||||
Sbjct: 959 atatggcttatagatcagctggtattatgaga 928
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6147
Number of Sequences: 1807
Number of extensions: 6147
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)